omicverse-single-cell-trajectory-inference
Pass
Audited by Gen Agent Trust Hub on Jun 29, 2026
Risk Level: SAFE
Full Analysis
- [SAFE]: The skill instructions and logic are consistent with the intended purpose of performing single-cell trajectory inference. No malicious commands or safety bypass attempts were found.
- [EXTERNAL_DOWNLOADS]: The documentation identifies optional Python dependencies
pcurvepy2andmellonrequired for Slingshot and Palantir gene-trend methods. These are legitimate libraries used in single-cell research. - [COMMAND_EXECUTION]: The acceptance configuration defines automated test commands to execute the
scripts/trajectory_smoke.pyvalidation script. These commands are used solely for verifying the integrity of the trajectory branches. - [SAFE]: The validation script includes a monkey-patching mechanism to override an internal library function for resource management (limiting CPU jobs) during testing. This is a common and benign practice for environment compatibility.
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