single-cell-multi-omics-integration
Pass
Audited by Gen Agent Trust Hub on Jul 22, 2026
Risk Level: SAFE
Full Analysis
- [EXTERNAL_DOWNLOADS]: The skill uses
ov.utils.download_tosica_gmt()to fetch gene-set files from the vendor's resources, which is a standard procedure for the TOSICA label transfer workflow. - [COMMAND_EXECUTION]: Textual instructions in the troubleshooting section guide the user or agent to install required bioinformatics dependencies such as
mofapy2,simba, andsimba_pbgusingpipto ensure the environment is correctly prepared for analysis. - [PROMPT_INJECTION]: The skill handles external data files including
.h5adAnnData and.gmtgene-sets (ingestion points). While explicit boundary markers for text within these files are not defined, the skill outlines capabilities such as model training (tosica.train) and HDF5 file writing (mofa_run). Potential indirect injection risks are addressed through a 'Defensive Validation Patterns' section that provides sanitization and validation of input files and metadata structure.
Audit Metadata