tcga-bulk-data-preprocessing-with-omicverse
Warn
Audited by Snyk on Aug 6, 2026
Risk Level: MEDIUM
Full Analysis
MEDIUM W011: Third-party content exposure detected (indirect prompt injection risk).
- Third-party content exposure detected (medium risk: 0.30). The skill’s runtime workflow ingests user-provided local GDC download artifacts (e.g.,
gdc_sample_sheet.<date>.tsvandclinical.cart.<date>/XML/JSON) viaov.bulk.pyTCGA(sample_sheet_path, download_dir, clinical_dir)and then runsadata_init()/adata_meta_init()/survial_init(), so outsider-authored free text can be read if an attacker can place poisoned files into those directories.
Issues (1)
W011
MEDIUMThird-party content exposure detected (indirect prompt injection risk).
Audit Metadata