tcga-bulk-data-preprocessing-with-omicverse

Warn

Audited by Snyk on Aug 6, 2026

Risk Level: MEDIUM
Full Analysis

MEDIUM W011: Third-party content exposure detected (indirect prompt injection risk).

  • Third-party content exposure detected (medium risk: 0.30). The skill’s runtime workflow ingests user-provided local GDC download artifacts (e.g., gdc_sample_sheet.<date>.tsv and clinical.cart.<date>/ XML/JSON) via ov.bulk.pyTCGA(sample_sheet_path, download_dir, clinical_dir) and then runs adata_init()/adata_meta_init()/survial_init(), so outsider-authored free text can be read if an attacker can place poisoned files into those directories.

Issues (1)

W011
MEDIUM

Third-party content exposure detected (indirect prompt injection risk).

Audit Metadata
Risk Level
MEDIUM
Analyzed
Aug 6, 2026, 10:28 AM
Issues
1