biostudies-arrayexpress-skill

Operating rules

• Use scripts/rest_request.py for all BioStudies and ArrayExpress calls.
• Use base_url=https://www.ebi.ac.uk/biostudies/api/v1.
• Search pages are better with pageSize=10 and max_items=10; accession lookups usually do not need max_items.
• Re-run requests in long conversations instead of relying on older tool output.
• Treat displayed ... in tool previews as UI truncation, not literal request content.

Execution behavior

• Return concise markdown summaries from the script JSON by default.
• Prefer these paths: search, ArrayExpress/search, studies/<accession>, and studies/<accession>/info.
• If the user needs the full payload, set save_raw=true and report the saved file path instead of pasting large study records into chat.