clinvar-database
Pass
Audited by Gen Agent Trust Hub on Jun 26, 2026
Risk Level: SAFEEXTERNAL_DOWNLOADSREMOTE_CODE_EXECUTIONCOMMAND_EXECUTION
Full Analysis
- [EXTERNAL_DOWNLOADS]: The skill facilitates the download of clinical genomic datasets and tool installers from official National Center for Biotechnology Information (NCBI) servers including eutils.ncbi.nlm.nih.gov and ftp.ncbi.nlm.nih.gov.
- [REMOTE_CODE_EXECUTION]: Includes instructions to install the 'Entrez Direct' toolset by fetching a shell script from the NCBI FTP server and executing it directly via a shell pipe. This is the standard, documented installation method for this well-known scientific utility.
- [COMMAND_EXECUTION]: Provides numerous shell and Python code snippets for querying biological APIs and processing large genomic files using standard command-line tools such as bcftools, awk, curl, and wget.
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