review
Perform a code review.
Arguments: $ARGUMENTS (optional scope)
- commit: Review only staged files for commit
- pr [number]: Review all files changed in the current PR (or specific PR number)
- all: Review the entire codebase
- If no argument provided:
- If in a PR branch: defaults to 'pr'
- Otherwise: defaults to 'commit'
Phase 1: Scope Determination
- Determine scope based on $ARGUMENTS
- If reviewing a PR, fetch PR details and linked issue with
gh pr viewandgh issue view
Phase 2: Review
- Run available linting tools for detected languages
- Check against project standards from CLAUDE.md (80 char limit, whitespace, naming)
- Review for: correctness, performance, security, maintainability, test coverage
- If PR: check alignment with target issue requirements and CI/CD status with
gh pr checks
More from seabbs/claude-code-config
taskfile-automation
Expert guidance for using Task (taskfile.dev) automation tool to discover and execute project development commands
1.2Kacademic-writing-standards
Expert knowledge of academic writing standards for peer-reviewed papers, including citation integrity, style compliance, clarity, and scientific writing best practices. Use when reviewing or editing academic manuscripts, papers, or research documentation.
25analyzing-research-papers
Expert methodology for analyzing and summarizing research papers, extracting key contributions, methodological details, and contextualizing findings. Use when reading papers from PDFs, DOIs, or URLs to create structured summaries for researchers.
25grant-compliance-checking
Expert knowledge of research grant compliance requirements, deliverables tracking, and funder expectations. Use when reviewing work against grant specifications, preparing progress reports, or ensuring alignment with funding requirements from NSF, NIH, EU, and other agencies.
7r-development
Expert guidance for R package development following best practices for devtools, testthat, roxygen2, and R ecosystem tools
7project-organization
Expert guidance for setting up and organizing research software projects following Sam Abbott's established patterns for R packages, Julia packages, and research projects
6