bio-ontology-mapper
Installation
SKILL.md
Bio-Ontology Mapper
Overview
Biomedical terminology normalization tool that maps free-text clinical and scientific concepts to standardized ontologies for semantic interoperability and data harmonization.
Key Capabilities:
- Multi-Ontology Support: SNOMED CT, MeSH, ICD-10, LOINC, RxNorm
- Entity Extraction: NER for diseases, symptoms, procedures, drugs
- Fuzzy Matching: Handle typos, abbreviations, and synonyms
- Confidence Scoring: Reliability metrics for each mapping
- Batch Processing: Normalize large datasets efficiently
- Cross-Mapping: Translate between ontology systems