ppi-string-query
Installation
SKILL.md
STRING Protein-Protein Interaction Query
Query the STRING database to retrieve protein-protein interactions with comprehensive confidence scores.
When to Use
- Find interaction partners for a protein (by UniProt ID)
- Retrieve confidence scores for PPIs (experimental, text mining, database)
- Build protein interaction networks for pathway analysis
- Identify potential protein complexes or functional modules
Workflow
Basic Query
from open_biomed.tools.tool_registry import TOOLS