variant-annotation
Installation
SKILL.md
Variant Annotation
Query and interpret gene variant clinical significance from ClinVar and dbSNP databases with ACMG guideline support.
Purpose
Provide comprehensive variant annotation including:
- Clinical significance classification (Pathogenic, Likely Pathogenic, VUS, Likely Benign, Benign)
- ACMG guideline-based pathogenicity assessment
- Population allele frequencies (gnomAD, ExAC, 1000 Genomes)
- Disease and phenotype associations
- Functional predictions (SIFT, PolyPhen, CADD)