skills/smithery.ai/analyse-issue

analyse-issue

Installation
SKILL.md

Analyze a GitHub issue for validity

Instructions

When handling GitHub issues:

  1. View the issue: Use gh issue view [number] to read the issue
  2. Analyze validity: Assess if the request is medically and terminologically valid (this is NOT always the case, so please be careful)
  • Try to understand the specific design pattern a disease belongs to. Do that by looking at similar classes, and by carefully considering the yaml files in src/patterns/dosdp-patterns/, which define design patterns.
  • If a suitable pattern exists, but you think its underspecified, you may suggest improvements to the pattern (as part of your final report, read on)
  • If no suitable pattern exists, you should propose one, at least in a rough outline, as part of the final report (read on)
  1. Search for improvements: Look, for example, for more specific parents/terms that might be better
    • As usual, use obo-grepl.obo for the search
    • If any of the diseases analysed as part of this issue belongs to a design pattern (as determined above) but lacks a logical definition and human readable definition, you may propose one as part of the issue
  2. Present findings in the following format (see below). Write them to a file @src/ontology/tmp/issue_x_analysis.md, where "x" should be the issue number.
  3. Post comment. ALWAYS ASK FOR PERMISSION TO DO THIS. Offer to post the the file created as a comment to the issue being analysed (using gh). ALWAYS ASK FOR PERMISSION TO DO THIS.

Model information

Installs
1
First Seen
Mar 31, 2026
analyse-issue from smithery.ai