bio-batch-processing
Installation
SKILL.md
Version Compatibility
Reference examples tested with: BioPython 1.83+
Before using code patterns, verify installed versions match. If versions differ:
- Python:
pip show <package>thenhelp(module.function)to check signatures
If code throws ImportError, AttributeError, or TypeError, introspect the installed package and adapt the example to match the actual API rather than retrying.
Batch Processing
"Process all my sequence files in a directory" → Iterate, merge, split, convert, and generate summary statistics across multiple sequence files.
- Python:
SeqIO.parse(),Path.glob()(BioPython, pathlib)
Process multiple sequence files efficiently using Biopython.