skills/smithery.ai/bio-batch-processing

bio-batch-processing

Installation
SKILL.md

Version Compatibility

Reference examples tested with: BioPython 1.83+

Before using code patterns, verify installed versions match. If versions differ:

  • Python: pip show <package> then help(module.function) to check signatures

If code throws ImportError, AttributeError, or TypeError, introspect the installed package and adapt the example to match the actual API rather than retrying.

Batch Processing

"Process all my sequence files in a directory" → Iterate, merge, split, convert, and generate summary statistics across multiple sequence files.

  • Python: SeqIO.parse(), Path.glob() (BioPython, pathlib)

Process multiple sequence files efficiently using Biopython.

Required Imports

Installs
1
First Seen
Apr 2, 2026
bio-batch-processing from smithery.ai