bio-variant-calling-clinical-interpretation
Installation
SKILL.md
Version Compatibility
Reference examples tested with: Entrez Direct 21.0+, bcftools 1.19+, cyvcf2 0.30+
Before using code patterns, verify installed versions match. If versions differ:
- Python:
pip show <package>thenhelp(module.function)to check signatures - CLI:
<tool> --versionthen<tool> --helpto confirm flags
If code throws ImportError, AttributeError, or TypeError, introspect the installed package and adapt the example to match the actual API rather than retrying.
Clinical Variant Interpretation
Prioritize and interpret variants for clinical significance using databases and ACMG/AMP guidelines.