Nextflow Pipeline to Galaxy Workflow

When to Use

Use this skill when:

• Converting a complete Nextflow pipeline (e.g., nf-core pipeline)
• Creating a full Galaxy solution with multiple workflows
• Planning a large-scale conversion project

Don't use this skill if:

• Converting a single process (use nf-process-to-galaxy-tool instead)
• Converting a single subworkflow (use nf-subworkflow-to-galaxy-workflow instead)

Step-by-Step Process

Step 1: Clarify Workflow Scope with User