Single-cell preprocessing with omicverse

Overview

Follow this skill when a user needs to reproduce the preprocessing workflow from the omicverse notebooks t_preprocess.ipynb, t_preprocess_cpu.ipynb, and t_preprocess_gpu.ipynb. The tutorials operate on the 10x PBMC3k dataset and cover QC filtering, normalisation, highly variable gene (HVG) detection, dimensionality reduction, and downstream embeddings.