gget
Pass
Audited by Gen Agent Trust Hub on Apr 29, 2026
Risk Level: SAFE
Full Analysis
- [SAFE]: The skill serves as a wrapper for the 'gget' library, a recognized bioinformatics tool used to query public genomic databases such as Ensembl, NCBI, and UniProt. All documented interactions target legitimate scientific APIs.
- [EXTERNAL_DOWNLOADS]: The skill includes instructions for 'gget setup' commands that download essential datasets, including AlphaFold model parameters and the ELM database. These resources are hosted by trusted scientific institutions and are standard dependencies for the tool's functionality.
- [CREDENTIALS_UNSAFE]: The skill correctly handles sensitive information by requiring users to provide their own API keys for optional integrations (OpenAI, COSMIC) via command-line parameters. No hardcoded secrets or unauthorized access to local credential files were detected.
- [COMMAND_EXECUTION]: The provided Python utility scripts implement routine bioinformatics workflows using standard libraries (pandas, matplotlib). They process user-provided biological sequences and gene lists without any evidence of malicious command injection or privilege escalation.
- [DATA_EXFILTRATION]: Network operations are limited to established biological databases and user-configured AI services. There is no evidence of unauthorized data collection or exfiltration to untrusted domains.
Audit Metadata