The Agent Skills Directory

[EXTERNAL_DOWNLOADS]: The skill provides instructions to install the 'gget' package using standard Python package managers (pip, uv). 'gget' is a well-known open-source bioinformatics tool developed by the Pachter Lab at Caltech.
[COMMAND_EXECUTION]: The instructions involve executing the 'gget' command-line interface and Python module for legitimate bioinformatics data retrieval, such as sequence lookups, BLAST searches, and gene metadata queries. All commands are documented for their intended scientific purpose.
[INDIRECT_PROMPT_INJECTION]: The skill involves fetching data from external bioinformatics databases like Ensembl and UniProt. While this represents an ingestion of external data, these are reputable scientific repositories, and the skill includes recommendations for human review and reproducibility logs to ensure data integrity.

gget