tooluniverse-rnaseq-deseq2
Pass
Audited by Gen Agent Trust Hub on Apr 16, 2026
Risk Level: SAFE
Full Analysis
- [SAFE]: The skill provides structured instructions for performing RNA-seq analysis using PyDESeq2 and gseapy. It emphasizes data validation and statistical rigor.
- [EXTERNAL_DOWNLOADS]: Recommends the installation of standard, reputable Python packages (pandas, numpy, scipy, pydeseq2, gseapy, anndata) and common R packages (clusterProfiler, org.Hs.eg.db) for extended functionality.
- [COMMAND_EXECUTION]: Includes standard pip installation commands for setting up the required environment. No unauthorized or hidden command execution patterns were found.
- [DATA_EXFILTRATION]: While the skill processes user-provided count matrices and metadata files, it does not contain any instructions for transmitting this data to external or untrusted servers. Integration with ToolUniverse is used for gene annotation and is consistent with the skill's purpose.
Audit Metadata