bio-clinical-biostatistics-categorical-tests
Installation
SKILL.md
Version Compatibility
Reference examples tested with: scipy 1.12+ (Boschloo and Barnard added in 1.7), statsmodels 0.14+, pingouin 0.5+, exact2x2 (R) 1.6+, pandas 2.1+, numpy 1.26+.
Before using code patterns, verify installed versions match. If versions differ:
- Python:
pip show <package>thenhelp(module.function)to check signatures - R packages cited for reference (exact2x2, Exact, ratesci): use
packageVersion()then?function_nameto verify parameters
If code throws ImportError, AttributeError, or TypeError, introspect the installed package and adapt the example to match the actual API rather than retrying.
Categorical Association Tests for Clinical Data
"Test association between categorical variables" -> Determine whether treatment and a categorical clinical outcome are statistically independent (or that marginal proportions agree, for paired data) using a test calibrated to the design, the sample size, and the regulatory question.