bio-pathway-reactome
Pass
Audited by Gen Agent Trust Hub on Oct 8, 2026
Risk Level: SAFE
Full Analysis
- [SAFE]: The skill utilizes standard Bioconductor packages (ReactomePA, clusterProfiler, org.Hs.eg.db) for genomic data analysis. These are established and trusted libraries within the scientific community.
- [SAFE]: Network operations are limited to official and well-known scientific services. The
ReactomeGSApackage communicates with the hosted Reactome AnalysisService for comparative analysis, and the scripts generate links to the official Reactome Pathway Browser. These interactions are legitimate and intrinsic to the skill's purpose. - [SAFE]: The R code examples follow secure programming practices, such as using
tempdir()for file outputs to avoid cluttering or overwriting local data, and setting seeds (set.seed) to ensure the reproducibility of permutation-based statistical tests.
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