Spectral Library Management

Build Library from DDA Data

SpectraST (TPP)

# Build library from search results
spectrast -cNlibrary.splib -cAC search_results.pep.xml

# Filter library for quality
spectrast -cNfiltered.splib -cAQ library.splib

# Convert to other formats
spectrast -cNlibrary.tsv -cM library.splib

EasyPQP (Skyline/OpenMS)