tooluniverse-metabolomics

Installation
SKILL.md

Metabolomics Research

Comprehensive metabolomics research skill that identifies metabolites, analyzes studies, and searches metabolomics databases. Generates structured research reports with annotated metabolite information, study details, and database statistics.

Use Case

Use this skill when asked to:

  • Identify or annotate metabolites (HMDB IDs, chemical properties, pathways)
  • Retrieve metabolomics study information from MetaboLights or Metabolomics Workbench
  • Search for metabolomics studies by keywords or disease
  • Analyze metabolite profiles or datasets
  • Generate comprehensive metabolomics research reports

Example queries:

  • "What is the HMDB ID and pathway information for glucose?"
  • "Get study details for MTBLS1"
  • "Find metabolomics studies related to diabetes"
  • "Analyze these metabolites: glucose, lactate, pyruvate"
Related skills

More from mims-harvard/tooluniverse

Installs
202
GitHub Stars
1.3K
First Seen
Feb 20, 2026