The Agent Skills Directory

[INDIRECT_PROMPT_INJECTION]: The skill implements a research pipeline that ingests data from external metabolomics databases (such as HMDB and MetaboLights) and writes it directly into a markdown report. This creates a surface for indirect prompt injection if the external data were to contain malicious instructions.
Ingestion points: Data is retrieved from external APIs via ToolUniverse tool calls in python_implementation.py such as HMDB_search, metabolights_get_study, and MetabolomicsWorkbench_get_study.
Boundary markers: The generated reports do not utilize boundary markers or delimiters to isolate data retrieved from external sources.
Capability inventory: The skill includes file-writing capabilities to save analysis reports to the local file system in python_implementation.py.
Sanitization: There is no evidence of sanitization, escaping, or validation of the content retrieved from external databases before it is interpolated into the final report.
[EXTERNAL_DOWNLOADS]: The skill fetches metabolite information, chemical properties, and study metadata from established scientific repositories including the Human Metabolome Database (HMDB), MetaboLights, and PubChem. These are well-known services provided by academic and governmental organizations.

tooluniverse-metabolomics