The Agent Skills Directory

[Generic REST Client Usage]: The scripts/rest_request.py script acts as a general-purpose REST client. While the skill's instructions focus on the RCSB PDB service, the underlying script is capable of performing HTTP GET and POST requests to user-defined endpoints with custom headers and bodies.
[File System Interaction]: The skill includes functionality to save raw API responses to the local file system through the save_raw and raw_output_path parameters. This allows for data persistence and is intended for scientific workflows where raw JSON or FASTA files are required.
[Data Retrieval from External Services]: The skill fetches configuration and data from rcsb.org, a well-known scientific database for structural biology. These network operations are essential for the skill's primary function of retrieving protein structure metadata.
[Indirect Prompt Injection Surface]: The skill processes data from external API responses, which introduces a potential surface for indirect instructions.
Ingestion points: External data enters the agent context through the execute function in scripts/rest_request.py via network calls.
Boundary markers: The script returns data in a compact format, but it does not utilize explicit markers to isolate retrieved content from the agent's instructions.
Capability inventory: The skill includes network access and file-writing capabilities across its scripts.
Sanitization: The script applies data truncation and compaction to manage response size, though it does not perform deep content sanitization for embedded instructions.

rcsb-pdb-skill