tooluniverse-immune-repertoire-analysis

Pass

Audited by Gen Agent Trust Hub on Oct 12, 2026

Risk Level: SAFEINDIRECT_PROMPT_INJECTION
Full Analysis
  • [INDIRECT_PROMPT_INJECTION]: The skill processes external immune repertoire data files which could contain malicious content.\n
  • Ingestion points: The load_airr_data function in SKILL.md reads data from files like clonotypes.txt and filtered_contig_annotations.csv.\n
  • Boundary markers: None. The instructions do not define delimiters or warnings to ignore embedded instructions in the sequencing data.\n
  • Capability inventory: The skill uses pandas for file reading, matplotlib for file writing (rarefaction_curve.png), and the tooluniverse package for network-based searches (IEDB_search_tcells, PubMed_search).\n
  • Sanitization: CDR3 sequences are interpolated directly into PubMed search queries (e.g., in predict_specificity_vdjdb) without escaping or validation, creating a potential path where malicious data in the source file could manipulate downstream tool behavior.
Audit Metadata
Risk Level
SAFE
Analyzed
Oct 12, 2026, 05:25 AM