metagenomics
Pass
Audited by Gen Agent Trust Hub on Jul 5, 2026
Risk Level: SAFE
Full Analysis
- [SAFE]: The skill documents a legitimate scientific workflow for metagenomic analysis using industry-standard tools such as fastp, Kraken2, Bracken, MetaPhlAn, and HUMAnN. All shell command patterns follow standard usage for these tools.
- [COMMAND_EXECUTION]: The skill defines command-line patterns for processing biological data. These operations are restricted to established bioinformatics software and occur within the user's local environment for the purpose of sequence analysis.
- [DATA_EXPOSURE]: The skill processes biological sequence data (FASTQ) and generates taxonomic/functional profiles. It does not access sensitive system files, credentials, or environment variables.
- [EXTERNAL_DOWNLOADS]: No unauthorized external downloads or remote code execution patterns were detected. References to databases like $KRAKEN_DB are standard for these tools.
Audit Metadata